dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000110_6|CGC2
Gene ID: MGYG000000110_03286
Location and strand information: 112213 - 113583 (+)
Family: 2.A.3.1.3
Protein type: TC
Protein description: Aromatic amino acid transport protein AroP

Gene clsuter ID: MGYG000000110_6|CGC2
Gene ID: MGYG000000110_03287
Location and strand information: 114032 - 115441 (+)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000000110_6|CGC2
Gene ID: MGYG000000110_03288
Location and strand information: 115441 - 116391 (+)
Family: CBM42|GH43|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.9868
Protein molecular weight: 36461.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000110_6|CGC2
Gene ID: MGYG000000110_03289
Location and strand information: 116485 - 117339 (-)
Family: 9.B.125.1.1
Protein type: TC
Protein description: Protein AmpE

Gene clsuter ID: MGYG000000110_6|CGC2
Gene ID: MGYG000000110_03290
Location and strand information: 117336 - 117899 (-)
Family: null
Protein type: null
Protein description: 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD

Gene clsuter ID: MGYG000000110_6|CGC2
Gene ID: MGYG000000110_03291
Location and strand information: 117987 - 118880 (+)
Family: null
Protein type: null
Protein description: Nicotinate-nucleotide pyrophosphorylase [carboxylating]

Gene clsuter ID: MGYG000000110_6|CGC2
Gene ID: MGYG000000110_03292
Location and strand information: 119056 - 119493 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000110_6|CGC2
Gene ID: MGYG000000110_03293
Location and strand information: 119509 - 120894 (+)
Family: 3.A.15.1.1
Protein type: TC
Protein description: putative type II secretion system protein HxcR

Gene clsuter ID: MGYG000000110_6|CGC2
Gene ID: MGYG000000110_03294
Location and strand information: 120887 - 122086 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: Type II secretion system protein F

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000110_03286	Aromatic amino acid transport protein AroP	TC	112213	113583	+	2.A.3.1.3
MGYG000000110_03287	Inner membrane symporter YicJ	TC	114032	115441	+	2.A.2.3.4
MGYG000000110_03288	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	115441	116391	+	CBM42\| GH43\| GH43_26
MGYG000000110_03289	Protein AmpE	TC	116485	117339	-	9.B.125.1.1
MGYG000000110_03290	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	null	117336	117899	-	Amidase_2
MGYG000000110_03291	Nicotinate-nucleotide pyrophosphorylase [carboxylating]	null	117987	118880	+	QRPTase_N\| QRPTase_C
MGYG000000110_03292	hypothetical protein	TC	119056	119493	+	3.A.15.2.1
MGYG000000110_03293	putative type II secretion system protein HxcR	TC	119509	120894	+	3.A.15.1.1
MGYG000000110_03294	Type II secretion system protein F	TC	120887	122086	+	3.A.15.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature